Supporters of the club have been told to stop chanting.
The fans sang the name of the owner during the game.
The UK government has imposed sanctions on Russian billionaire Roman Abramovich in response to Russia's invasion of Ukraine.
Chris Philp said that fans need to remember that Russian president Vladimir Putin has close ties to the person who has committed barbaric acts in Ukraine.
He told the radio programme that he understands why fans of the club have affection for him, but that he is associated with a regime that commits atrocities more important than football.
I would ask them to think very carefully before doing that again because the barbaric acts of the Putin regime which Abramovich has supported is far more important than football.
The sanctions imposed on Thursday mean that the club is not for sale, though a special licence granted by the government allows it to keep operating.
Philp says the licence could be changed to allow the sale to go through.
He told Sky News that the sale would not be allowed as the licence conditions are written.
If a buyer emerged it would be possible for that buyer or the football club to approach the government and ask for the conditions to be changed in a way that would allow the sale to take place.
The minister held a meeting with the Football Supporters Association and three fans groups on Thursday to discuss the impact of the sanctions and the process for the club to apply for an amended licence.
The application could include proposed amendments to ticket sales.
The minister indicated that the government will work with the club and leagues to consider changes. It is for the team to give a clear idea of where the revenues will go.
Raine Group, the American investment firm that is handling the sale, has stopped the process and is trying to find out how the sale might go ahead.
It will take time to get assurances from the government that the club's proceeds won't go toAbramovich, so how quickly the club can be sold depends on that.
The people working on the deal were told that the proceeds from the sale would go to victims of the war in Ukraine. The loan from the Russian billionaire will not be deducted from the price.
Before sanctions were imposed, industry experts thought that the price that was being offered for the club was too high.
Nick Candy is a British property investor.
As many as 20 credible parties are still interested in investing, and there has been no drop-out from potential investors.
A person for Nick Candy said that they are still interested in making a bid.
This is a time of great uncertainty for all of the fans. No one is the owner of a football club, you are the custodian of it for the fans and the community.
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