Researchers discover “Humpty-Dumpty” water-based mechanism of human sex reversal at edge of developmental ambiguity
Structural models of wild-type and mutant side chains. (A) L-shaped SRY HMG box (α-helices labeled α1-3) bound to a DNA target site (light green spheres; PDB entry 1J46) (7). Shown at right is an expanded view of boxed region depicting minor-wing mini-core (full-length numbering scheme). (B) Rigid-body substitution of mutant side chains at box position 72 (sticks) in an otherwise transparent CPK model. Models of the three clinical mutants (34, 44, 45): Y127C in red, Y127F in orange and Y127H in green. Credit: Frontiers in Endocrinology (2022). DOI: 10.3389/fendo.2022.945030

A group of researchers from the Indiana University School of Medicine have discovered a mechanism that causes children with XY chromosomes but female bodies to have sex differently. At the beginning of male development, the water molecule is bridged between the male factor and the DNA control site.

The study focuses on the substitution of a tyrosine by phenylalanine. The embryo is placed at the borderline of genetic function by the clinicalmutation shared by a fertile XY father and his sterile XY daughter. The two aromatic rings are very different in how they anchor a water molecule in theProtein-DNA complex.

"Loss of a single atom in SRY, an oxygen atom in a critical tyrosine, impairs the robustness of male development," said Michael Weiss, MD, PhD, chair of the Department of Biochemistry andMolecular Biology.

In some families, the daughters can have XY chromosomes because of a genetic condition called SRY. Sex chromosomes can change over evolutionary time scales, leading to new upstream switches being recruited. The initial steps can be difficult to follow.

The position 72 in the SRY DNA-binding domain was the focus of the study. The lifetime of theProtein-DNA complex was extended by the researchers when they discovered that tyrosine was at this position.

This mechanism is found in a family of switch factors in multicellular animals. The latter family is fundamental to patterning and development.

Papers about their work were published recently. The first describes their findings relating to box 72 and the second describes how the water-mediated clamp mechanism works. Weiss said they call it a "humpty-dumpty" model because of the way it's broken down.

Joseph D. Racca is the first author of the new study. It took a long time toUncover the water-mediated mechanism. Simulations of boundary water molecule in this system gave critical insight.

A distinctive water molecule is anchored by the tyrosine as a bridge to the DNA, and then it will leave. A water molecule in the bulk solvent will restore the bridge.

The hydration of the domain is altered by the change from tyrosine to phenylalanine. The tail would cause the dissociation of the genes.

XY female children with differences in sexual differentiation are at risk for rare forms of gonadal cancer. This syndrome needs to be recognized so that surgeons can remove the gonads before cancer starts. The woman who is affected has a normal uterus and birth canal, so she may have children with the help of a donor egg.

A variety of birth defects can be caused by SOX genes.

Weiss said that swerving genes provide clues to help us understand a broad range of SOX diseases and could lead to improved protocols for different areas of medicine. Sex determination is not the only thing that goes beyond SRY.

There is more information about the Threshold of Human Sex Determination. I. SRY and Swyer Syndrome at the Edge of Brilliance is a book. 10.389/fendo.

The threshold of human sex determination isuous. The second part of the story. SRY exploits water-mediated clamps at the edge of ambiguity in a book. There is a document titled "10389/fendo.2022.1029177".